STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00622YSIRK family gram-positive signal peptide. (396 aa)    
Predicted Functional Partners:
C821_01908
LPXTG-domain-containing protein cell wall anchor domain protein.
  
 0.979
C821_01875
Hypothetical protein.
  
 0.756
C821_01234
S-DNA-T family DNA segregation ATPase FtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.689
C821_01235
Hypothetical protein.
    
   0.689
C821_01520
Hypothetical protein.
    
   0.689
dltC
D-alanine-poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
   
   0.682
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.682
C821_00475
Chromosome partitioning protein.
   
   0.651
C821_01902
LPXTG-domain-containing protein cell wall anchor domain protein.
  
 0.628
C821_01395
Sigma-70 family RNA polymerase sigma factor.
   
  0.626
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.