C821_00727 protein (Lactobacillus sp. ASF360)

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Score

C821_00727

RNA polymerase primary sigma factor. (72 aa)

Predicted Functional Partners:

rpoB

0.943

rpoC

0.939

rpoA

0.933

rpoZ

0.931

dnaG

0.903

C821_00728

0.900

C821_01533

0.887

C821_00295

0.849

spxA

0.806

C821_01176

0.803

Your Current Organism:

Lactobacillus sp. ASF360

NCBI taxonomy Id: 97137
Other names: L. sp. ASF360

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C821_00295	C821_00727	C821_00295	C821_00727	Hypothetical protein.	RNA polymerase primary sigma factor.	0.849
C821_00295	C821_00728	C821_00295	C821_00728	Hypothetical protein.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.849
C821_00295	C821_01533	C821_00295	C821_01533	Hypothetical protein.	Hypothetical protein.	0.527
C821_00295	rpoA	C821_00295	C821_01432	Hypothetical protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.877
C821_00295	rpoB	C821_00295	C821_01465	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.920
C821_00295	rpoC	C821_00295	C821_01464	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.867
C821_00295	rpoZ	C821_00295	C821_01590	Hypothetical protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.868
C821_00727	C821_00295	C821_00727	C821_00295	RNA polymerase primary sigma factor.	Hypothetical protein.	0.849
C821_00727	C821_00728	C821_00727	C821_00728	RNA polymerase primary sigma factor.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.900
C821_00727	C821_01176	C821_00727	C821_01176	RNA polymerase primary sigma factor.	Hypothetical protein; Belongs to the Fur family.	0.803
C821_00727	C821_01533	C821_00727	C821_01533	RNA polymerase primary sigma factor.	Hypothetical protein.	0.887
C821_00727	dnaG	C821_00727	C821_00726	RNA polymerase primary sigma factor.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.903
C821_00727	rpoA	C821_00727	C821_01432	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
C821_00727	rpoB	C821_00727	C821_01465	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.943
C821_00727	rpoC	C821_00727	C821_01464	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.939
C821_00727	rpoZ	C821_00727	C821_01590	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.931
C821_00727	spxA	C821_00727	C821_01251	RNA polymerase primary sigma factor.	Regulatory protein spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.	0.806
C821_00728	C821_00295	C821_00728	C821_00295	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	Hypothetical protein.	0.849
C821_00728	C821_00727	C821_00728	C821_00727	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	RNA polymerase primary sigma factor.	0.900
C821_00728	C821_01176	C821_00728	C821_01176	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	Hypothetical protein; Belongs to the Fur family.	0.803