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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00848Glucan 1,6-alpha-glucosidase. (539 aa)    
Predicted Functional Partners:
C821_01330
PTS system, sucrose-specific IIBC component.
  
 
 0.984
C821_01331
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.931
C821_01665
Maltose phosphorylase.
  
 
 0.919
C821_01531
Alpha-galactosidase.
  
 
 0.914
C821_00131
Hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.902
C821_00248
Fructokinase.
  
 
 0.898
C821_00428
Neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
0.838
C821_01189
Hypothetical protein.
 
 
0.829
C821_00847
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.825
C821_01194
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.789
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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