STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00884Competence protein ComEC. (205 aa)    
Predicted Functional Partners:
C821_00885
Hypothetical protein.
   
 0.941
C821_00886
Hypothetical protein.
   
 0.930
C821_00883
DNA polymerase III, delta subunit.
     
 0.850
C821_01073
Hypothetical protein.
 
  
 0.728
C821_01203
comF family protein.
  
  
 0.692
C821_01463
Hypothetical protein.
  
  
 0.675
C821_01074
Hypothetical protein.
 
  
 0.672
C821_01072
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
   
  
 0.666
C821_00887
comEA protein.
 
  
 0.658
C821_00792
DNA protecting protein DprA.
  
  
 0.643
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.