STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_00991Penicillin-binding protein 2B. (56 aa)    
Predicted Functional Partners:
C821_01725
Hypothetical protein; Belongs to the peptidase S11 family.
  
 
 0.939
divIB
Hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.935
C821_00758
1A family penicillin-binding protein.
   
 0.922
C821_01718
1A family penicillin-binding protein.
   
 0.922
C821_01719
Penicillin-binding protein 2A.
   
 0.922
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
 
 
 0.898
mraZ
Protein MraZ; Belongs to the MraZ family.
  
  
 0.877
C821_00897
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 0.865
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.860
C821_00893
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 0.846
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.