STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01065Hypothetical protein. (92 aa)    
Predicted Functional Partners:
C821_01064
Cystathione beta-lyase.
 
     0.946
C821_01066
Hypothetical protein.
 
     0.904
C821_01063
Mannose-6-phosphate isomerase, class I; Belongs to the mannose-6-phosphate isomerase type 1 family.
 
     0.653
C821_01987
Homocysteine S-methyltransferase.
  
  
  0.552
C821_01060
Hypothetical protein.
       0.526
C821_01061
Hypothetical protein.
       0.526
C821_01062
Hypothetical protein.
       0.526
C821_00451
Aminopeptidase N.
    
  0.485
C821_00872
Aspartate kinase; Belongs to the aspartokinase family.
    
  0.446
C821_01487
Hypothetical protein.
    
  0.445
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.