STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01076Hypothetical protein. (170 aa)    
Predicted Functional Partners:
C821_01075
UPF0082 protein.
       0.580
C821_00466
Hypothetical protein.
  
     0.527
C821_00537
Hypothetical protein.
  
     0.492
C821_01231
Hypothetical protein.
  
   
 0.468
C821_01682
Nicotinate-nucleotide adenylyltransferase.
  
     0.457
C821_00312
Hypothetical protein.
  
     0.436
C821_01074
Hypothetical protein.
       0.427
C821_01073
Hypothetical protein.
       0.426
C821_01078
Hypothetical protein.
 
     0.412
C821_01077
Hypothetical protein.
       0.409
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.