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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01080Cof-like hydrolase. (272 aa)    
Predicted Functional Partners:
C821_00149
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.898
C821_00945
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
   
 0.877
C821_01088
Cof-like hydrolase.
 
 
  0.876
C821_00353
Hypothetical protein; Belongs to the flavin oxidoreductase frp family.
    
  0.840
C821_00339
PTS system, mannose/fructose/sorbose family, IIB component.
    
 0.762
C821_00361
Cof-like hydrolase.
  
 
 
0.686
C821_00836
Cof-like hydrolase.
 
 
 
0.640
C821_01111
Cof-like hydrolase.
 
 
 
0.620
C821_01079
UPF0756 membrane protein.
       0.533
C821_00467
Hypothetical protein.
    
  0.488
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.