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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01084Hypothetical protein. (238 aa)    
Predicted Functional Partners:
C821_01083
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.791
crcB
Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.791
crcB-2
Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.791
C821_00381
Hypothetical protein.
  
     0.746
C821_01087
CopY/TcrY family copper transport repressor.
       0.740
C821_00879
Hypothetical protein.
  
     0.735
C821_00009
Hypothetical protein.
  
     0.730
C821_00611
Hypothetical protein.
  
     0.713
C821_00995
Hypothetical protein.
  
     0.691
C821_01112
Hypothetical protein.
  
     0.690
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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