STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01133Hypothetical protein. (232 aa)    
Predicted Functional Partners:
C821_01132
Divalent anion:Na+ symporter (DASS) family transporter.
       0.745
C821_00989
Hypothetical protein.
 
  
 0.741
ldh
L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate.
       0.713
C821_01311
Hypothetical protein.
    
 
 0.687
C821_01490
ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family.
    
 
 0.687
C821_01743
Hypothetical protein.
    
 
 0.687
C821_01126
Citrate (Pro-3S)-lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
    
 0.585
C821_01803
Ribulose-phosphate 3-epimerase.
    
  0.579
C821_01826
Alcohol dehydrogenase.
    
  0.574
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 
  0.546
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.