STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01156Hypothetical protein. (1007 aa)    
Predicted Functional Partners:
C821_01531
Alpha-galactosidase.
 
 
 0.986
C821_01638
Aldose 1-epimerase.
 
 
 0.969
C821_00496
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
    0.950
C821_00009
Hypothetical protein.
  
 
 0.910
C821_01158
Lactose permease.
 
  
 0.906
C821_01231
Hypothetical protein.
  
 
 0.890
C821_01157
PTS system, glucose subfamily, IIA component.
  
  
 0.882
C821_00381
Hypothetical protein.
  
 0.826
C821_01155
Hypothetical protein.
 
   
 0.825
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.805
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.