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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01282Hypothetical protein. (291 aa)    
Predicted Functional Partners:
C821_01302
Thioredoxin; Belongs to the thioredoxin family.
  
 0.969
C821_01706
Hypothetical protein.
  
 0.913
C821_01283
Membrane-associated protein.
       0.821
C821_00801
Hypothetical protein.
  
 0.784
C821_01651
Glutamine synthetase.
    
 0.762
C821_01983
NADH peroxidase.
    
 0.640
metG
methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
 
 
 0.619
C821_01803
Ribulose-phosphate 3-epimerase.
  
 
 0.595
C821_01906
Serine hydroxymethyltransferase.
   
 
 0.594
C821_00514
NADH dehydrogenase.
    
 0.586
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.