STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01334Hypothetical protein. (183 aa)    
Predicted Functional Partners:
C821_01335
Hypothetical protein.
 
  
 0.991
C821_01333
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
 
     0.936
C821_01336
Heavy metal translocating P-type ATPase.
 
  
 0.935
C821_00280
Hypothetical protein.
 
    0.664
C821_00638
Hypothetical protein; Belongs to the HesB/IscA family.
  
    0.578
C821_00279
Hypothetical protein.
 
    0.543
C821_01337
Hypothetical protein.
 
     0.535
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.486
C821_01338
Hypothetical protein.
  
  
 0.457
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.