STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01340Hypothetical protein. (328 aa)    
Predicted Functional Partners:
C821_01341
Hypothetical protein.
 
     0.736
C821_00901
Hypothetical protein.
  
     0.715
C821_00633
aspartyl-tRNA synthetase.
  
     0.700
C821_01897
Hypothetical protein.
  
     0.694
C821_01600
Hypothetical protein.
  
     0.667
C821_01342
Hypothetical protein.
 
     0.653
C821_00108
Hypothetical protein.
  
     0.642
C821_01711
Hypothetical protein.
  
     0.626
C821_01112
Hypothetical protein.
  
     0.592
C821_01629
Hypothetical protein.
  
     0.558
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.