STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01391Hypothetical protein. (129 aa)    
Predicted Functional Partners:
C821_00328
Hypothetical protein.
  
     0.767
C821_01898
Hypothetical protein.
  
     0.712
C821_01012
Hypothetical protein.
  
     0.709
C821_00176
Hypothetical protein.
  
     0.671
C821_01896
Hypothetical protein.
  
     0.602
C821_01392
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
 
     0.591
C821_00307
Hypothetical protein.
  
     0.568
C821_01818
LPXTG-domain-containing protein cell wall anchor domain protein.
  
     0.562
C821_01821
Hypothetical protein.
  
     0.558
C821_01020
Hypothetical protein.
  
     0.552
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.