C821_01395 protein (Lactobacillus sp. ASF360)

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

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Score

C821_01395

Sigma-70 family RNA polymerase sigma factor. (187 aa)

Predicted Functional Partners:

rpoC

0.983

rpoB

0.972

rpoA

0.929

rpoZ

0.927

C821_01268

0.843

C821_01805

0.809

C821_01809

0.809

C821_00790

0.774

C821_00791

0.774

mrnC

0.678

Your Current Organism:

Lactobacillus sp. ASF360

NCBI taxonomy Id: 97137
Other names: L. sp. ASF360

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C821_00790	C821_00791	C821_00790	C821_00791	DNA topoisomerase I.	DNA topoisomerase I.	0.987
C821_00790	C821_01395	C821_00790	C821_01395	DNA topoisomerase I.	Sigma-70 family RNA polymerase sigma factor.	0.774
C821_00790	rpoA	C821_00790	C821_01432	DNA topoisomerase I.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
C821_00790	rpoB	C821_00790	C821_01465	DNA topoisomerase I.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.475
C821_00790	rpoC	C821_00790	C821_01464	DNA topoisomerase I.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.869
C821_00790	rpoZ	C821_00790	C821_01590	DNA topoisomerase I.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.646
C821_00791	C821_00790	C821_00791	C821_00790	DNA topoisomerase I.	DNA topoisomerase I.	0.987
C821_00791	C821_01395	C821_00791	C821_01395	DNA topoisomerase I.	Sigma-70 family RNA polymerase sigma factor.	0.774
C821_00791	rpoA	C821_00791	C821_01432	DNA topoisomerase I.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
C821_00791	rpoB	C821_00791	C821_01465	DNA topoisomerase I.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.475
C821_00791	rpoC	C821_00791	C821_01464	DNA topoisomerase I.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.869
C821_00791	rpoZ	C821_00791	C821_01590	DNA topoisomerase I.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.586
C821_01268	C821_01395	C821_01268	C821_01395	Hypothetical protein.	Sigma-70 family RNA polymerase sigma factor.	0.843
C821_01395	C821_00790	C821_01395	C821_00790	Sigma-70 family RNA polymerase sigma factor.	DNA topoisomerase I.	0.774
C821_01395	C821_00791	C821_01395	C821_00791	Sigma-70 family RNA polymerase sigma factor.	DNA topoisomerase I.	0.774
C821_01395	C821_01268	C821_01395	C821_01268	Sigma-70 family RNA polymerase sigma factor.	Hypothetical protein.	0.843
C821_01395	C821_01805	C821_01395	C821_01805	Sigma-70 family RNA polymerase sigma factor.	Serine/threonine protein kinase, bacterial.	0.809
C821_01395	C821_01809	C821_01395	C821_01809	Sigma-70 family RNA polymerase sigma factor.	Serine/threonine protein kinase, bacterial.	0.809
C821_01395	mrnC	C821_01395	C821_01397	Sigma-70 family RNA polymerase sigma factor.	Ribonuclease III family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.678
C821_01395	rpoA	C821_01395	C821_01432	Sigma-70 family RNA polymerase sigma factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.929