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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01406Hypothetical protein. (267 aa)    
Predicted Functional Partners:
C821_01407
Two-component system, AgrA family, sensor histidine kinase AgrC.
 
 
 0.999
C821_01404
Hypothetical protein.
 
   
 0.733
C821_01408
Hypothetical protein.
  
 
 0.713
C821_00165
Hypothetical protein.
  
     0.660
C821_01523
Hypothetical protein.
 
   
 0.648
C821_01524
ABC-type bacteriocin transporter.
 
     0.639
C821_00988
Hypothetical protein.
  
     0.560
C821_00368
Hypothetical protein.
  
     0.547
C821_01676
Hypothetical protein.
    
 0.484
C821_01818
LPXTG-domain-containing protein cell wall anchor domain protein.
  
     0.472
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.