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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01511Hypothetical protein. (198 aa)    
Predicted Functional Partners:
C821_01510
Hypothetical protein.
 
     0.942
C821_01927
Hypothetical protein.
  
 
  0.940
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.880
C821_00098
CPA2 family monovalent cation:H+ antiporter-2; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.784
C821_00309
Monovalent cation:proton antiporter-2 (CPA2) family transporter.
  
 
 0.693
C821_01981
Hypothetical protein.
  
 
 0.693
C821_01494
Hypothetical protein.
 
     0.668
C821_01495
Hypothetical protein.
 
     0.644
C821_01509
Hypothetical protein.
 
     0.620
C821_00513
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
    
  0.582
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.