C821_01611 protein (Lactobacillus sp. ASF360)

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Score

C821_01611

spx/MgsR family transcriptional regulator; Belongs to the ArsC family. (123 aa)

Predicted Functional Partners:

C821_01248

0.880

rpoA

0.819

rpoC

0.802

C821_01610

0.786

C821_00727

0.751

C821_00728

0.751

rpoZ

0.731

rpoE

0.722

C821_00895

0.714

rpoB

0.714

Your Current Organism:

Lactobacillus sp. ASF360

NCBI taxonomy Id: 97137
Other names: L. sp. ASF360

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C821_00727	C821_00728	C821_00727	C821_00728	RNA polymerase primary sigma factor.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.900
C821_00727	C821_00895	C821_00727	C821_00895	RNA polymerase primary sigma factor.	UPF0356 protein; Belongs to the UPF0356 family.	0.714
C821_00727	C821_01611	C821_00727	C821_01611	RNA polymerase primary sigma factor.	spx/MgsR family transcriptional regulator; Belongs to the ArsC family.	0.751
C821_00727	rpoA	C821_00727	C821_01432	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
C821_00727	rpoB	C821_00727	C821_01465	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.943
C821_00727	rpoC	C821_00727	C821_01464	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.939
C821_00727	rpoE	C821_00727	C821_01540	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.	0.796
C821_00727	rpoZ	C821_00727	C821_01590	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.931
C821_00728	C821_00727	C821_00728	C821_00727	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	RNA polymerase primary sigma factor.	0.900
C821_00728	C821_00895	C821_00728	C821_00895	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	UPF0356 protein; Belongs to the UPF0356 family.	0.714
C821_00728	C821_01611	C821_00728	C821_01611	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	spx/MgsR family transcriptional regulator; Belongs to the ArsC family.	0.751
C821_00728	rpoA	C821_00728	C821_01432	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.948
C821_00728	rpoB	C821_00728	C821_01465	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.950
C821_00728	rpoC	C821_00728	C821_01464	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.949
C821_00728	rpoE	C821_00728	C821_01540	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.	0.764
C821_00728	rpoZ	C821_00728	C821_01590	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.931
C821_00895	C821_00727	C821_00895	C821_00727	UPF0356 protein; Belongs to the UPF0356 family.	RNA polymerase primary sigma factor.	0.714
C821_00895	C821_00728	C821_00895	C821_00728	UPF0356 protein; Belongs to the UPF0356 family.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.714
C821_00895	C821_01611	C821_00895	C821_01611	UPF0356 protein; Belongs to the UPF0356 family.	spx/MgsR family transcriptional regulator; Belongs to the ArsC family.	0.714
C821_00895	rpoA	C821_00895	C821_01432	UPF0356 protein; Belongs to the UPF0356 family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875