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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01629Hypothetical protein. (138 aa)    
Predicted Functional Partners:
C821_00801
Hypothetical protein.
    
 0.657
C821_00974
Hypothetical protein.
  
     0.623
C821_01630
Hypothetical protein.
       0.560
C821_01340
Hypothetical protein.
  
     0.558
C821_00346
Acetaldehyde dehydrogenase/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
  0.538
C821_01729
hydroxymethylglutaryl-CoA synthase.
    
  0.533
C821_00350
Phosphoenolpyruvate carboxykinase (ATP).
    
  0.510
C821_01628
Hypothetical protein.
       0.510
C821_00612
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
  
 
  0.500
C821_01627
Hypothetical protein.
 
     0.472
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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