STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01638Aldose 1-epimerase. (328 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.999
C821_01156
Hypothetical protein.
 
 
 0.969
C821_01330
PTS system, sucrose-specific IIBC component.
  
 
 0.965
C821_01531
Alpha-galactosidase.
  
 
  0.941
galT
Galactose-1-phosphate uridylyltransferase.
 
  
 0.926
C821_00842
Glucokinase.
    
 0.862
C821_01637
Raffinose carrier protein.
  
 
 0.820
C821_00456
Hypothetical protein.
  
 0.731
C821_01641
Hypothetical protein.
  
 
 0.717
C821_01642
LacI family transcriptional regulator.
 
   
 0.693
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.