STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01641Hypothetical protein. (81 aa)    
Predicted Functional Partners:
C821_01156
Hypothetical protein.
   
 0.742
C821_01642
LacI family transcriptional regulator.
 
   
 0.718
C821_01638
Aldose 1-epimerase.
  
 
 0.717
C821_00131
Hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.716
C821_01496
Hypothetical protein.
  
     0.671
C821_01645
HTH-type transcriptional regulator lacR.
 
   
 0.666
C821_01876
Hypothetical protein.
  
  
 0.663
C821_01347
Hypothetical protein.
  
     0.645
C821_01531
Alpha-galactosidase.
    
 0.637
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
     
 0.635
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.