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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01651Glutamine synthetase. (445 aa)    
Predicted Functional Partners:
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.979
C821_00801
Hypothetical protein.
  
 
 0.958
C821_00346
Acetaldehyde dehydrogenase/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.954
C821_00771
Carbamoyl-phosphate synthase, small subunit.
  
 
 0.917
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
  
 
 0.917
C821_00295
Hypothetical protein.
  
 
 0.884
C821_00430
Maltose/maltodextrin transport system substrate-binding protein.
    
   0.875
C821_00772
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.858
C821_01617
Carbamoyl-phosphate synthase large chain.
  
 
 0.858
C821_01618
Carbamoyl-phosphate synthase large chain.
  
 
 0.858
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.