STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01664Beta-phosphoglucomutase. (221 aa)    
Predicted Functional Partners:
C821_01665
Maltose phosphorylase.
 
 0.999
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
  0.913
C821_00149
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.906
C821_01092
Hypothetical protein.
    
  0.872
C821_01666
Hypothetical protein.
 
    0.816
C821_01001
HAD hydrolase, family IA.
  
  
 
0.666
C821_01638
Aldose 1-epimerase.
  
 
 0.635
C821_00220
TIGR02254 family HAD hydrolase.
  
 0.617
C821_01667
Hypothetical protein.
 
     0.614
C821_00428
Neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.600
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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