STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01774Hypothetical protein. (216 aa)    
Predicted Functional Partners:
C821_01908
LPXTG-domain-containing protein cell wall anchor domain protein.
  
 0.943
C821_01770
Hypothetical protein.
 
     0.843
C821_01772
LPXTG-domain-containing protein cell wall anchor domain protein.
 
     0.785
C821_01951
Hypothetical protein.
  
     0.773
C821_01136
rib/alpha/Esp surface antigen.
 
 
 0.764
C821_01758
Hypothetical protein.
  
     0.703
C821_01768
LPXTG-domain-containing protein cell wall anchor domain protein.
 
     0.682
C821_01123
LPXTG-domain-containing protein cell wall anchor domain protein.
 
  
  0.657
C821_01875
Hypothetical protein.
  
 0.628
C821_01902
LPXTG-domain-containing protein cell wall anchor domain protein.
 
0.603
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.