STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C821_01965Hypothetical protein. (130 aa)    
Predicted Functional Partners:
C821_01676
Hypothetical protein.
 
 0.971
C821_01966
Hypothetical protein.
     0.940
C821_01060
Hypothetical protein.
 
 0.928
C821_01963
Hypothetical protein.
  
 0.907
C821_00485
Hypothetical protein.
 
 0.888
C821_00819
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.863
C821_00188
PAS domain S-box protein.
 
 0.846
C821_00295
Hypothetical protein.
   
 
 0.482
C821_00484
Hypothetical protein.
  
  
 
0.449
C821_00244
Hypothetical protein.
   
 
 0.446
Your Current Organism:
Lactobacillus sp. ASF360
NCBI taxonomy Id: 97137
Other names: L. sp. ASF360
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.