STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C820_00166Hypothetical protein; Belongs to the CoA-transferase III family. (395 aa)    
Predicted Functional Partners:
C820_02658
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.890
C820_00886
butyryl-CoA dehydrogenase.
 
 0.650
C820_00167
Hypothetical protein.
 
     0.626
C820_02709
Hypothetical protein.
 
 0.615
C820_00165
Hypothetical protein.
  
    0.528
C820_00486
Hypothetical protein.
    
 0.510
C820_00571
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
   
 
  0.500
C820_02832
PFL2/glycerol dehydratase family glycyl radical enzyme.
     
 0.491
C820_02703
Hypothetical protein.
 
   
 0.441
C820_02118
Hypothetical protein.
    
  0.440
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.