STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C820_00251Hypothetical protein. (225 aa)    
Predicted Functional Partners:
C820_00250
Hypothetical protein.
       0.752
C820_00249
Phage phi LC3 family holin.
       0.657
C820_00248
Hypothetical protein.
       0.653
C820_00252
DNA adenine methylase.
  
    0.652
C820_00245
Hypothetical protein.
 
    0.581
C820_00241
Tape measure domain-containing protein.
 
     0.562
C820_00243
Hypothetical protein.
  
    0.513
C820_00244
Hypothetical protein.
  
    0.512
C820_00246
Hypothetical protein.
       0.494
C820_00247
Hypothetical protein.
       0.494
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.