Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C820_00263Stage III sporulation protein AG. (189 aa)    
Predicted Functional Partners:
C820_00264
Hypothetical protein.
 
  
 0.997
C820_00261
Stage III sporulation protein AE.
 
  
 0.983
C820_00262
Stage III sporulation protein AF.
 
  
 0.983
C820_00257
Stage III sporulation protein AA.
 
  
 0.982
C820_00258
Stage III sporulation protein AB.
 
  
 0.979
C820_00260
Stage III sporulation protein AD.
 
  
 0.971
C820_00259
Stage III sporulation protein AC.
 
  
 0.956
C820_01632
Stage IV sporulation protein B.
 
   
 0.853
C820_01606
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.845
C820_01141
Sporulation transcriptional regulator SpoIIID.
  
  
 0.839
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.