Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C820_00518Gamma-glutamyltransferase. (537 aa)    
Predicted Functional Partners:
C820_02043
xaa-His dipeptidase.
     
 0.900
C820_02181
xaa-His dipeptidase.
     
 0.900
C820_00725
Hypothetical protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.845
C820_02183
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.825
C820_00562
Hypothetical protein; Belongs to the glutamine synthetase family.
    
  0.807
C820_01434
Glutamate synthase (NADPH), homotetrameric.
     
 0.805
C820_00517
Hypothetical protein.
       0.590
C820_00519
Hypothetical protein.
       0.563
C820_00642
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
    
 
 0.496
C820_01295
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.443
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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