Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C820_00560Hypothetical protein. (71 aa)    
Predicted Functional Partners:
C820_00557
Hypothetical protein.
 
 
 0.995
C820_00558
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 
 
 0.993
C820_00559
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 
 0.993
C820_00715
Pyruvate/2-ketoisovalerate family 2-oxoacid:acceptor oxidoreductase, gamma subunit.
 
 
 0.977
C820_00716
Hypothetical protein.
 
 
 0.977
C820_00717
Hypothetical protein.
 
 
 0.977
C820_00561
Hypothetical protein.
 
     0.939
C820_00718
Hypothetical protein.
  
  
 
0.910
C820_02193
Isocitrate dehydrogenase (NAD+).
     
  0.900
C820_01434
Glutamate synthase (NADPH), homotetrameric.
    
 0.808
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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