Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
C820_01030Stage V sporulation protein B. (505 aa)    
Predicted Functional Partners:
C820_02373
Sporulation protein YqfD.
 
   
 0.659
C820_02289
Stage V sporulation protein T.
 
   
 0.624
C820_01606
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.615
C820_00264
Hypothetical protein.
  
  
 0.584
C820_01439
Sporulation protein YabP.
 
   
 0.582
C820_00260
Stage III sporulation protein AD.
  
  
 0.573
C820_00261
Stage III sporulation protein AE.
  
  
 0.547
C820_01029
Galactose-1-phosphate uridylyltransferase.
 
     0.547
C820_00263
Stage III sporulation protein AG.
  
    0.545
C820_01661
Sporulation integral membrane protein YlbJ.
  
   
 0.543
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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