Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C820_01064Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type. (181 aa)    
Predicted Functional Partners:
C820_01065
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
 0.999
C820_00532
Hypothetical protein.
 
 
 0.985
argH
Argininosuccinate lyase.
    
 0.814
C820_00143
Hypothetical protein.
     
  0.800
C820_01688
Hypothetical protein.
     
  0.800
C820_02658
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.743
C820_00486
Hypothetical protein.
  
  
 0.679
C820_02818
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
  
 0.552
cinA
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
       0.460
C820_01066
Hypothetical protein.
       0.446
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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