Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C820_01239Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (1032 aa)    
Predicted Functional Partners:
C820_01212
Flagellar motor switch protein FliN.
 
 
 0.999
C820_01238
Hypothetical protein.
 
 
 0.998
C820_01228
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.996
C820_01222
Flagellar hook-basal body protein.
 
 
 0.995
C820_01229
Flagellar protein FliS.
 
 
 0.993
C820_01211
Flagellar motor switch protein FliM.
 
  
 0.991
C820_01196
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.987
C820_01199
Flagellar motor switch protein FliG.
 
  
 0.987
C820_01198
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.985
C820_01195
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.983
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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