STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C820_01250Hypothetical protein. (1568 aa)    
Predicted Functional Partners:
C820_01247
Hypothetical protein.
 
     0.909
C820_01249
Hypothetical protein.
       0.775
C820_00644
Hypothetical protein.
  
     0.752
C820_01774
Hypothetical protein.
  
     0.747
C820_01248
FlhB domain-containing protein.
       0.730
C820_02749
Polysaccharide pyruvyl transferase CsaB.
  
   
 0.729
C820_02240
Hypothetical protein.
  
  
  0.686
C820_00813
Hypothetical protein.
  
    0.675
C820_01237
Hypothetical protein.
 
     0.657
C820_01238
Hypothetical protein.
 
 
   0.657
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.