STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C820_01351Hypothetical protein. (376 aa)    
Predicted Functional Partners:
C820_01350
Hypothetical protein.
 
     0.782
C820_01348
Hypothetical protein.
 
    
0.507
C820_01349
Hypothetical protein.
       0.489
rnhB
TIGR00252 family protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the UPF0102 family.
       0.489
C820_01353
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.483
C820_01354
Hypothetical protein.
       0.466
C820_00306
Hypothetical protein.
   
   0.454
C820_01718
Hypothetical protein.
 
    0.421
C820_02302
Hypothetical protein.
    
   0.408
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.