Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C820_01409Hypothetical protein. (55 aa)    
Predicted Functional Partners:
C820_01410
Hypothetical protein.
       0.718
C820_00789
txe/YoeB family addiction module toxin.
    
 0.686
C820_01190
AbrB family transcriptional regulator.
    
 0.650
C820_01887
Hypothetical protein.
     
 0.645
C820_02762
mRNA interferase; Toxic component of a type II toxin-antitoxin (TA) system.
    
 0.639
C820_00754
Hypothetical protein.
     
 0.576
C820_00802
Hypothetical protein.
     
 0.576
C820_02005
Hypothetical protein.
     
 0.576
C820_00752
Hypothetical protein.
     
 0.547
C820_00753
Hypothetical protein.
     
 0.547
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.