Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C820_00226 | C820_00296 | C820_00226 | C820_00296 | Hypothetical protein. | PTS system, Fru family, IIC component. | 0.657 |
C820_00226 | C820_01588 | C820_00226 | C820_01588 | Hypothetical protein. | Fructose-1,6-bisphosphate aldolase, class II. | 0.609 |
C820_00226 | C820_01732 | C820_00226 | C820_01732 | Hypothetical protein. | Hypothetical protein. | 0.999 |
C820_00226 | C820_02818 | C820_00226 | C820_02818 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.935 |
C820_00226 | cinA | C820_00226 | C820_01302 | Hypothetical protein. | Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family. | 0.599 |
C820_00226 | ileS | C820_00226 | C820_01468 | Hypothetical protein. | isoleucine-tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. | 0.496 |
C820_00226 | lspA | C820_00226 | C820_01589 | Hypothetical protein. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.417 |
C820_00296 | C820_00226 | C820_00296 | C820_00226 | PTS system, Fru family, IIC component. | Hypothetical protein. | 0.657 |
C820_00296 | C820_01588 | C820_00296 | C820_01588 | PTS system, Fru family, IIC component. | Fructose-1,6-bisphosphate aldolase, class II. | 0.977 |
C820_00296 | C820_01732 | C820_00296 | C820_01732 | PTS system, Fru family, IIC component. | Hypothetical protein. | 0.750 |
C820_00296 | C820_02818 | C820_00296 | C820_02818 | PTS system, Fru family, IIC component. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.638 |
C820_00296 | lspA | C820_00296 | C820_01589 | PTS system, Fru family, IIC component. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.632 |
C820_01588 | C820_00226 | C820_01588 | C820_00226 | Fructose-1,6-bisphosphate aldolase, class II. | Hypothetical protein. | 0.609 |
C820_01588 | C820_00296 | C820_01588 | C820_00296 | Fructose-1,6-bisphosphate aldolase, class II. | PTS system, Fru family, IIC component. | 0.977 |
C820_01588 | C820_02818 | C820_01588 | C820_02818 | Fructose-1,6-bisphosphate aldolase, class II. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.968 |
C820_01588 | lspA | C820_01588 | C820_01589 | Fructose-1,6-bisphosphate aldolase, class II. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.534 |
C820_01615 | C820_01732 | C820_01615 | C820_01732 | RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.679 |
C820_01615 | lspA | C820_01615 | C820_01589 | RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.429 |
C820_01732 | C820_00226 | C820_01732 | C820_00226 | Hypothetical protein. | Hypothetical protein. | 0.999 |
C820_01732 | C820_00296 | C820_01732 | C820_00296 | Hypothetical protein. | PTS system, Fru family, IIC component. | 0.750 |
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