Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C820_00718 | C820_01572 | C820_00718 | C820_01572 | Hypothetical protein. | Hypothetical protein. | 0.639 |
C820_00718 | C820_01725 | C820_00718 | C820_01725 | Hypothetical protein. | Hypothetical protein. | 0.888 |
C820_00718 | C820_01732 | C820_00718 | C820_01732 | Hypothetical protein. | Hypothetical protein. | 0.675 |
C820_00718 | C820_01738 | C820_00718 | C820_01738 | Hypothetical protein. | Hypothetical protein. | 0.931 |
C820_00718 | C820_01739 | C820_00718 | C820_01739 | Hypothetical protein. | Hypothetical protein. | 0.931 |
C820_00718 | acpP | C820_00718 | C820_00477 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.960 |
C820_00718 | acpP-2 | C820_00718 | C820_01669 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.960 |
C820_00718 | dnaJ | C820_00718 | C820_01322 | Hypothetical protein. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.882 |
C820_00718 | lgt | C820_00718 | C820_01740 | Hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.406 |
C820_00718 | rnfB | C820_00718 | C820_02267 | Hypothetical protein. | Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.886 |
C820_01572 | C820_00718 | C820_01572 | C820_00718 | Hypothetical protein. | Hypothetical protein. | 0.639 |
C820_01572 | C820_01725 | C820_01572 | C820_01725 | Hypothetical protein. | Hypothetical protein. | 0.835 |
C820_01572 | C820_01732 | C820_01572 | C820_01732 | Hypothetical protein. | Hypothetical protein. | 0.418 |
C820_01572 | C820_01738 | C820_01572 | C820_01738 | Hypothetical protein. | Hypothetical protein. | 0.621 |
C820_01572 | C820_01739 | C820_01572 | C820_01739 | Hypothetical protein. | Hypothetical protein. | 0.621 |
C820_01572 | acpP | C820_01572 | C820_00477 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.944 |
C820_01572 | acpP-2 | C820_01572 | C820_01669 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.944 |
C820_01572 | dnaJ | C820_01572 | C820_01322 | Hypothetical protein. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.900 |
C820_01572 | rnfB | C820_01572 | C820_02267 | Hypothetical protein. | Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.695 |
C820_01725 | C820_00718 | C820_01725 | C820_00718 | Hypothetical protein. | Hypothetical protein. | 0.888 |
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