STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C820_02211Hybrid cluster protein-associated redox disulfide domain protein. (67 aa)    
Predicted Functional Partners:
C820_02210
Hypothetical protein.
       0.716
C820_01024
Hypothetical protein.
  
  
 0.693
C820_02121
Hypothetical protein.
  
     0.630
C820_02189
Hypothetical protein.
  
     0.459
C820_02452
Heavy metal translocating P-type ATPase.
     
 0.446
C820_01377
YbgI/family dinuclear metal center protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.431
C820_02724
Six-cysteine peptide SCIFF.
  
     0.427
C820_02212
Signal peptidase I; Belongs to the peptidase S26 family.
       0.426
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.