Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C820_00985 | C820_01199 | C820_00985 | C820_01199 | Hypothetical protein. | Flagellar motor switch protein FliG. | 0.439 |
C820_00985 | C820_01732 | C820_00985 | C820_01732 | Hypothetical protein. | Hypothetical protein. | 0.769 |
C820_00985 | C820_02303 | C820_00985 | C820_02303 | Hypothetical protein. | Hypothetical protein. | 0.527 |
C820_01199 | C820_00985 | C820_01199 | C820_00985 | Flagellar motor switch protein FliG. | Hypothetical protein. | 0.439 |
C820_01199 | C820_01211 | C820_01199 | C820_01211 | Flagellar motor switch protein FliG. | Flagellar motor switch protein FliM. | 0.999 |
C820_01199 | C820_01689 | C820_01199 | C820_01689 | Flagellar motor switch protein FliG. | YffH/AdpP family nudix-type nucleoside diphosphatase. | 0.439 |
C820_01199 | C820_01732 | C820_01199 | C820_01732 | Flagellar motor switch protein FliG. | Hypothetical protein. | 0.733 |
C820_01199 | C820_02303 | C820_01199 | C820_02303 | Flagellar motor switch protein FliG. | Hypothetical protein. | 0.518 |
C820_01211 | C820_01199 | C820_01211 | C820_01199 | Flagellar motor switch protein FliM. | Flagellar motor switch protein FliG. | 0.999 |
C820_01211 | C820_01732 | C820_01211 | C820_01732 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.510 |
C820_01211 | C820_02303 | C820_01211 | C820_02303 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.518 |
C820_01689 | C820_01199 | C820_01689 | C820_01199 | YffH/AdpP family nudix-type nucleoside diphosphatase. | Flagellar motor switch protein FliG. | 0.439 |
C820_01689 | C820_01732 | C820_01689 | C820_01732 | YffH/AdpP family nudix-type nucleoside diphosphatase. | Hypothetical protein. | 0.769 |
C820_01689 | C820_02303 | C820_01689 | C820_02303 | YffH/AdpP family nudix-type nucleoside diphosphatase. | Hypothetical protein. | 0.527 |
C820_01732 | C820_00985 | C820_01732 | C820_00985 | Hypothetical protein. | Hypothetical protein. | 0.769 |
C820_01732 | C820_01199 | C820_01732 | C820_01199 | Hypothetical protein. | Flagellar motor switch protein FliG. | 0.733 |
C820_01732 | C820_01211 | C820_01732 | C820_01211 | Hypothetical protein. | Flagellar motor switch protein FliM. | 0.510 |
C820_01732 | C820_01689 | C820_01732 | C820_01689 | Hypothetical protein. | YffH/AdpP family nudix-type nucleoside diphosphatase. | 0.769 |
C820_01732 | C820_02303 | C820_01732 | C820_02303 | Hypothetical protein. | Hypothetical protein. | 0.642 |
C820_01732 | grpE | C820_01732 | C820_01320 | Hypothetical protein. | Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dep [...] | 0.786 |
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