Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C820_02641Hypothetical protein. (430 aa)    
Predicted Functional Partners:
C820_01732
Hypothetical protein.
  
 
 0.972
C820_00226
Hypothetical protein.
  
  
 0.671
C820_00008
Hypothetical protein.
  
 
 0.548
C820_02862
Hypothetical protein.
  
 
 0.548
C820_00991
Hypothetical protein.
  
  
 0.546
C820_02658
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 
 0.523
pheT
phenylalanine-tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.508
C820_02642
Hypothetical protein; Belongs to the DEAD box helicase family.
       0.493
C820_00391
Hypothetical protein.
   
   0.488
C820_01802
Hypothetical protein.
   
 
 0.432
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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