Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
atpDV-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (225 aa)    
Predicted Functional Partners:
atpB
V-type ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.999
atpA
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
C820_02671
V-type H+-transporting ATPase subunit F.
 
 0.999
C820_02672
Hypothetical protein.
 
 0.999
atpE
Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
C820_02674
V-type H+-transporting ATPase subunit K; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
C820_02675
Hypothetical protein; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
C820_02676
ATP synthase archaeal, H subunit.
    
 0.957
C820_00973
Hypothetical protein.
     
  0.900
C820_00689
Calcium-translocating P-type ATPase, PMCA-type.
    
  0.730
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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