STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C820_02782Calcium-translocating P-type ATPase, PMCA-type. (882 aa)    
Predicted Functional Partners:
C820_00973
Hypothetical protein.
    
  0.870
C820_02781
Hypothetical protein.
  
 
 0.600
C820_02783
Hypothetical protein; Probably functions as a manganese efflux pump.
       0.544
C820_02780
Hypothetical protein.
       0.543
C820_02675
Hypothetical protein; Belongs to the V-ATPase 116 kDa subunit family.
    
 0.514
C820_01732
Hypothetical protein.
  
 
 0.505
C820_01164
Inosine-5'-monophosphate dehydrogenase.
   
 0.490
C820_02818
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.421
atpB
V-type ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
   
 0.419
atpA
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
    
 0.415
Your Current Organism:
Clostridium sp. ASF356
NCBI taxonomy Id: 97138
Other names: C. sp. ASF356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.