Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C820_00001 | C820_00547 | C820_00001 | C820_00547 | Hypothetical protein. | Hypothetical protein. | 0.493 |
C820_00001 | C820_02827 | C820_00001 | C820_02827 | Hypothetical protein. | TIGR02452 family protein. | 0.412 |
C820_00520 | C820_00547 | C820_00520 | C820_00547 | Hypothetical protein. | Hypothetical protein. | 0.564 |
C820_00520 | C820_01358 | C820_00520 | C820_01358 | Hypothetical protein. | Hypothetical protein. | 0.598 |
C820_00520 | C820_01704 | C820_00520 | C820_01704 | Hypothetical protein. | Hypothetical protein. | 0.406 |
C820_00520 | C820_02827 | C820_00520 | C820_02827 | Hypothetical protein. | TIGR02452 family protein. | 0.431 |
C820_00520 | kptA | C820_00520 | C820_02644 | Hypothetical protein. | Hypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.505 |
C820_00547 | C820_00001 | C820_00547 | C820_00001 | Hypothetical protein. | Hypothetical protein. | 0.493 |
C820_00547 | C820_00520 | C820_00547 | C820_00520 | Hypothetical protein. | Hypothetical protein. | 0.564 |
C820_00547 | C820_01358 | C820_00547 | C820_01358 | Hypothetical protein. | Hypothetical protein. | 0.776 |
C820_00547 | C820_01704 | C820_00547 | C820_01704 | Hypothetical protein. | Hypothetical protein. | 0.679 |
C820_00547 | C820_01705 | C820_00547 | C820_01705 | Hypothetical protein. | Hypothetical protein. | 0.557 |
C820_00547 | C820_02119 | C820_00547 | C820_02119 | Hypothetical protein. | Hypothetical protein. | 0.407 |
C820_00547 | C820_02827 | C820_00547 | C820_02827 | Hypothetical protein. | TIGR02452 family protein. | 0.684 |
C820_00547 | kptA | C820_00547 | C820_02644 | Hypothetical protein. | Hypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.584 |
C820_01358 | C820_00520 | C820_01358 | C820_00520 | Hypothetical protein. | Hypothetical protein. | 0.598 |
C820_01358 | C820_00547 | C820_01358 | C820_00547 | Hypothetical protein. | Hypothetical protein. | 0.776 |
C820_01358 | C820_01704 | C820_01358 | C820_01704 | Hypothetical protein. | Hypothetical protein. | 0.618 |
C820_01358 | C820_02119 | C820_01358 | C820_02119 | Hypothetical protein. | Hypothetical protein. | 0.613 |
C820_01358 | C820_02827 | C820_01358 | C820_02827 | Hypothetical protein. | TIGR02452 family protein. | 0.846 |
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