DFL_008176 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_008176

ABC1 domain-containing protein. (486 aa)

Predicted Functional Partners:

DFL_009076

0.875

COQ3

0.716

DFL_009521

0.666

DFL_007208

0.666

DFL_006403

0.666

DFL_001577

0.666

DFL_002791

0.654

DFL_000955

0.630

DFL_006982

0.627

DFL_009131

0.599

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COQ3	DFL_008176	A0A436ZQ50	A0A436ZN39	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	ABC1 domain-containing protein.	0.716
DFL_000955	DFL_002791	A0A437AFS3	A0A437ABH8	Pyrid_ox_like domain-containing protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.999
DFL_000955	DFL_006982	A0A437AFS3	A0A436ZUH0	Pyrid_ox_like domain-containing protein.	Uncharacterized protein.	0.999
DFL_000955	DFL_008176	A0A437AFS3	A0A436ZN39	Pyrid_ox_like domain-containing protein.	ABC1 domain-containing protein.	0.630
DFL_001577	DFL_008176	A0A437A8A5	A0A436ZN39	Uncharacterized protein.	ABC1 domain-containing protein.	0.666
DFL_002791	DFL_000955	A0A437ABH8	A0A437AFS3	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	Pyrid_ox_like domain-containing protein.	0.999
DFL_002791	DFL_006982	A0A437ABH8	A0A436ZUH0	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	Uncharacterized protein.	0.999
DFL_002791	DFL_008176	A0A437ABH8	A0A436ZN39	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	ABC1 domain-containing protein.	0.654
DFL_006403	DFL_008176	A0A437A0P0	A0A436ZN39	Uncharacterized protein.	ABC1 domain-containing protein.	0.666
DFL_006982	DFL_000955	A0A436ZUH0	A0A437AFS3	Uncharacterized protein.	Pyrid_ox_like domain-containing protein.	0.999
DFL_006982	DFL_002791	A0A436ZUH0	A0A437ABH8	Uncharacterized protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.999
DFL_006982	DFL_008176	A0A436ZUH0	A0A436ZN39	Uncharacterized protein.	ABC1 domain-containing protein.	0.627
DFL_007208	DFL_008176	A0A436ZVQ2	A0A436ZN39	Uncharacterized protein.	ABC1 domain-containing protein.	0.666
DFL_008176	COQ3	A0A436ZN39	A0A436ZQ50	ABC1 domain-containing protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.716
DFL_008176	DFL_000955	A0A436ZN39	A0A437AFS3	ABC1 domain-containing protein.	Pyrid_ox_like domain-containing protein.	0.630
DFL_008176	DFL_001577	A0A436ZN39	A0A437A8A5	ABC1 domain-containing protein.	Uncharacterized protein.	0.666
DFL_008176	DFL_002791	A0A436ZN39	A0A437ABH8	ABC1 domain-containing protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.654
DFL_008176	DFL_006403	A0A436ZN39	A0A437A0P0	ABC1 domain-containing protein.	Uncharacterized protein.	0.666
DFL_008176	DFL_006982	A0A436ZN39	A0A436ZUH0	ABC1 domain-containing protein.	Uncharacterized protein.	0.627
DFL_008176	DFL_007208	A0A436ZN39	A0A436ZVQ2	ABC1 domain-containing protein.	Uncharacterized protein.	0.666