Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008514AAA domain-containing protein. (785 aa)    
Predicted Functional Partners:
DFL_002789
Prohibitin.
   
 0.976
DFL_009360
Prohibitin.
   
 0.974
DFL_007156
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.947
DFL_004972
AAA domain-containing protein.
   
 0.938
DFL_006121
Uncharacterized protein.
   
 
 0.924
DFL_001792
Uncharacterized protein.
  
 
 0.911
DFL_002174
Uncharacterized protein.
 
  
 0.909
DFL_006065
Ribosomal_L2_C domain-containing protein.
   
 
 0.907
DFL_002227
Uncharacterized protein.
  
 
 0.903
DFL_008155
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.900
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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