DFL_008519 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DFL_008519

C2 NT-type domain-containing protein. (385 aa)

Predicted Functional Partners:

DFL_001273

0.579

DFL_009031

0.565

DFL_001664

0.521

DFL_001578

0.486

DFL_007347

0.485

DFL_003795

0.475

DFL_006771

0.473

DFL_007649

0.473

DFL_007482

0.472

DFL_005867

0.471

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_001273	DFL_001664	A0A437AGV1	A0A437A886	T5orf172 domain-containing protein.	DMAP-interaction domain-containing protein.	0.457
DFL_001273	DFL_005867	A0A437AGV1	A0A436ZZ24	T5orf172 domain-containing protein.	Uncharacterized protein.	0.506
DFL_001273	DFL_008519	A0A437AGV1	A0A436ZP18	T5orf172 domain-containing protein.	C2 NT-type domain-containing protein.	0.579
DFL_001578	DFL_001664	A0A437A8P1	A0A437A886	Uncharacterized protein.	DMAP-interaction domain-containing protein.	0.718
DFL_001578	DFL_003795	A0A437A8P1	A0A437A2W8	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.461
DFL_001578	DFL_007482	A0A437A8P1	A0A436ZVX6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.959
DFL_001578	DFL_008519	A0A437A8P1	A0A436ZP18	Uncharacterized protein.	C2 NT-type domain-containing protein.	0.486
DFL_001578	DFL_009031	A0A437A8P1	A0A436ZQR4	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.744
DFL_001664	DFL_001273	A0A437A886	A0A437AGV1	DMAP-interaction domain-containing protein.	T5orf172 domain-containing protein.	0.457
DFL_001664	DFL_001578	A0A437A886	A0A437A8P1	DMAP-interaction domain-containing protein.	Uncharacterized protein.	0.718
DFL_001664	DFL_003795	A0A437A886	A0A437A2W8	DMAP-interaction domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.400
DFL_001664	DFL_005867	A0A437A886	A0A436ZZ24	DMAP-interaction domain-containing protein.	Uncharacterized protein.	0.505
DFL_001664	DFL_008519	A0A437A886	A0A436ZP18	DMAP-interaction domain-containing protein.	C2 NT-type domain-containing protein.	0.521
DFL_003795	DFL_001578	A0A437A2W8	A0A437A8P1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.461
DFL_003795	DFL_001664	A0A437A2W8	A0A437A886	ANK_REP_REGION domain-containing protein.	DMAP-interaction domain-containing protein.	0.400
DFL_003795	DFL_007347	A0A437A2W8	A0A436ZVE4	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.838
DFL_003795	DFL_007482	A0A437A2W8	A0A436ZVX6	ANK_REP_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.521
DFL_003795	DFL_007649	A0A437A2W8	A0A436ZW92	ANK_REP_REGION domain-containing protein.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.456
DFL_003795	DFL_008519	A0A437A2W8	A0A436ZP18	ANK_REP_REGION domain-containing protein.	C2 NT-type domain-containing protein.	0.475
DFL_005867	DFL_001273	A0A436ZZ24	A0A437AGV1	Uncharacterized protein.	T5orf172 domain-containing protein.	0.506