Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008447Uncharacterized protein. (782 aa)    
Predicted Functional Partners:
DFL_001578
Uncharacterized protein.
    
 0.756
DFL_008431
Uncharacterized protein.
    
 0.625
DFL_009869
TPR_REGION domain-containing protein.
    
 0.617
DFL_006279
Amidase domain-containing protein.
    
 0.617
DFL_009498
Uncharacterized protein.
    
  0.596
DFL_001169
Uncharacterized protein.
    
  0.596
DFL_005034
Nsp1_C domain-containing protein.
    
 0.585
DFL_002332
Uncharacterized protein.
    
  0.540
DFL_000880
GLTP domain-containing protein.
      
 0.503
DFL_003590
B30.2/SPRY domain-containing protein.
    
 0.491
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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