Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008500Uncharacterized protein. (410 aa)    
Predicted Functional Partners:
DFL_000655
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
   0.842
DFL_008481
Uncharacterized protein.
      
 0.715
DFL_008848
Uncharacterized protein.
      
 0.667
DFL_004311
TPT domain-containing protein.
      
 0.663
DFL_002358
EamA domain-containing protein.
   
  
 0.645
DFL_009608
TPT domain-containing protein.
      
 0.629
DFL_007103
Uncharacterized protein.
      
 0.624
DFL_007190
Uncharacterized protein.
     
 0.565
DFL_000553
Uncharacterized protein.
   
  
 0.513
DFL_005979
Uncharacterized protein.
 
      0.492
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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